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started to play around with plotly

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didier amyot committed 2017-11-15 22:11:02 -05:00
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.gitignore
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/target
/classes
/checkouts
pom.xml
pom.xml.asc
*.jar
*.class
/.lein-*
/.nrepl-port
.hgignore
.hg/
.ipynb_checkpoints/plotly-checkpoint.ipynb
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{
"cells": [
{
"cell_type": "markdown",
"metadata": {},
"source": [
"## plotly implementation"
]
},
{
"cell_type": "code",
"execution_count": 29,
"metadata": {},
"outputs": [],
"source": [
"(require '[clojupyter.misc.display :as display]\n",
" '[clojure.java.io :as io]\n",
" '[cheshire.core :as cheshire]\n",
" '[clj-http.client :as client]\n",
" '[clojure.repl :refer :all]) ;; to have all the repl goodies"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"To access plotly api, we need an api key. The standard way is to store the api key in `$HOME/.plotly/.credentials` in a json object as defined in https://plot.ly/python/getting-started/. For that you will need to create a plotly account."
]
},
{
"cell_type": "code",
"execution_count": 61,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"your credentials are:\n",
" {:api_key 6FaFG4sgtpLnDrvzvFT1, :username didier, :stream_ids [8rcf9eam9j zupv6k3u4k]}\n"
]
}
],
"source": [
"(defn get-plotly-credentials\n",
" \"Returs the plotly credentials in $HOME/.plotly/.credentials\"\n",
" []\n",
" (let [home (-> \"HOME\" System/getenv io/as-file)\n",
" credential-file (io/file home \".plotly\" \".credentials\")]\n",
" (if (.exists credential-file)\n",
" (-> credential-file slurp (cheshire/parse-string true))\n",
" {})))\n",
"\n",
"(def plotly-cred (get-plotly-credentials))\n",
"(println \"your credentials are:\\n\" plotly-cred)"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"---\n",
"\n",
"Next, we need to create \"grids\". Grids are dataset stored on plotly that we can then plot. The plotting is done in two phases, uploding the datasets and then plotting the datasets."
]
},
{
"cell_type": "code",
"execution_count": 86,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"#'user/upload-grid"
]
},
"execution_count": 86,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"(defn upload-grid [grid cred] \n",
" (let [url \"https://api.plot.ly/v2/grids\";;\"https://api.plot.ly/v2/grids\" \"https://api.plot.ly/v2/grids\" ;;\n",
" headers {:Plotly-Client-Platform' \"curl\"}\n",
" auth \"didier:6FaFG4sgtpLnDrvzvFT1\"];;[(:username cred) (:api_key cred)]]\n",
" (println auth)\n",
" (client/post url {:basic-auth auth\n",
" :headers headers\n",
" :throw-entire-message? true\n",
" :form-params grid :content-type :json})))"
]
},
{
"cell_type": "code",
"execution_count": 87,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"#'user/my-grid"
]
},
"execution_count": 87,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"(def my-grid {:data \n",
" {:cols\n",
" {\n",
" :height {:data [10 203 102 404] :order 1}\n",
" :weight {:data [112 234 321 34] :order 2}}}})\n",
" "
]
},
{
"cell_type": "code",
"execution_count": 87,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"didier:6FaFG4sgtpLnDrvzvFT1\n",
"ExceptionInfo clj-http: status 401 {:request-time 908, :repeatable? false, :protocol-version {:name \"HTTP\", :major 1, :minor 1}, :streaming? true, :chunked? true, :reason-phrase \"UNAUTHORIZED\", :headers {\"Server\" \"nginx\", \"Via\" \"1.1 google\", \"Content-Type\" \"application/json\", \"Alt-Svc\" \"clear\", \"X-Frame-Options\" \"SAMEORIGIN\", \"Strict-Transport-Security\" \"max-age=31536000; includesubdomains; preload\", \"WWW-Authenticate\" \"Bearer realm=\\\"api\\\"\", \"Allow\" \"GET, POST, HEAD, OPTIONS\", \"Connection\" \"close\", \"Transfer-Encoding\" \"chunked\", \"Set-Cookie\" [\"plotly_sess_pr=z3l151u0weiecpy1jgmvp4bqaic9ksoo; Domain=.plot.ly; expires=Thu, 30-Nov-2017 03:09:02 GMT; httponly; Max-Age=1209600; Path=/; secure\" \"plotly_csrf_pr=b3rFF0ApmkYeHCK9Rjn9kKW30z2OyDkZ; Domain=.plot.ly; expires=Sat, 17-Nov-2018 03:09:02 GMT; Max-Age=31622400; Path=/; secure\" \"plotly_anoncsrf_pr=1Pv2vgnQIhIqOnw6bFy1kf4V2qAyXJ0r; Domain=.plot.ly; expires=Fri, 17-Nov-2017 03:09:02 GMT; httponly; Max-Age=86400; Path=/; secure\" \"GCLB=CNmkk46g4orXggE; path=/; HttpOnly; expires=Fri, 17-Nov-2017 03:09:02 GMT\"], \"Date\" \"Thu, 16 Nov 2017 03:09:02 GMT\", \"Vary\" \"Accept, Authorization, Cookie, Accept-Language\", \"x-xss-protection\" \"1; mode=block\", \"Content-Language\" \"en\"}, :orig-content-encoding nil, :status 401, :length -1, :body \"{\\\"errors\\\":[{\\\"code\\\":\\\"UNKNOWN\\\",\\\"message\\\":\\\"No Plotly-Client-Platform header found\\\",\\\"path\\\":null,\\\"field\\\":null}],\\\"detail\\\":\\\"No Plotly-Client-Platform header found\\\"}\", :trace-redirects []} slingshot.support/stack-trace (support.clj:201)\n"
]
},
{
"ename": "class clojure.lang.ExceptionInfo",
"evalue": "",
"output_type": "error",
"traceback": [
" support.clj: 201 slingshot.support$stack_trace/invoke ",
" client.clj: 238 clj_http.client$exceptions_response/invokeStatic ",
" client.clj: 230 clj_http.client$exceptions_response/invoke ",
" client.clj: 248 clj_http.client$wrap_exceptions$fn__2420/invoke ",
" client.clj: 724 clj_http.client$wrap_accept$fn__2666/invoke ",
" client.clj: 746 clj_http.client$wrap_accept_encoding$fn__2673/invoke ",
" client.clj: 707 clj_http.client$wrap_content_type$fn__2660/invoke ",
" client.clj: 948 clj_http.client$wrap_form_params$fn__2769/invoke ",
" client.clj: 983 clj_http.client$wrap_nested_params$fn__2791/invoke ",
" client.clj: 882 clj_http.client$wrap_method$fn__2727/invoke ",
" cookies.clj: 131 clj_http.cookies$wrap_cookies$fn__773/invoke ",
" links.clj: 63 clj_http.links$wrap_links$fn__2196/invoke ",
" client.clj: 1009 clj_http.client$wrap_unknown_host$fn__2799/invoke ",
" client.clj: 1181 clj_http.client$request_STAR_/invokeStatic ",
" client.clj: 1174 clj_http.client$request_STAR_/invoke ",
" client.clj: 1199 clj_http.client$post/invokeStatic ",
" client.clj: 1195 clj_http.client$post/doInvoke ",
" RestFn.java: 423 clojure.lang.RestFn/invoke ",
" core.clj: 3206 clojure.core$eval/invokeStatic ",
" core.clj: 3202 clojure.core$eval/invoke ",
" main.clj: 243 clojure.main$repl$read_eval_print__8572$fn__8575/invoke",
" main.clj: 261 clojure.main$repl$fn__8581/invoke ",
" main.clj: 177 clojure.main$repl/doInvoke ",
" RestFn.java: 1523 clojure.lang.RestFn/invoke ",
" AFn.java: 152 clojure.lang.AFn/applyToHelper ",
" AFn.java: 144 clojure.lang.AFn/applyTo ",
" core.clj: 657 clojure.core$apply/invokeStatic ",
" core.clj: 1965 clojure.core$with_bindings_STAR_/invokeStatic ",
" RestFn.java: 425 clojure.lang.RestFn/invoke ",
" AFn.java: 22 clojure.lang.AFn/run ",
"ThreadPoolExecutor.java: 1149 java.util.concurrent.ThreadPoolExecutor/runWorker ",
"ThreadPoolExecutor.java: 624 java.util.concurrent.ThreadPoolExecutor$Worker/run ",
" Thread.java: 748 java.lang.Thread/run "
]
}
],
"source": [
"(println (:body (upload-grid my-grid plotly-cred)))"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"curl --user didier:6FaFG4sgtpLnDrvzvFT1 -H \"Content-Type: application/json\" -H \"Plotly-Client-Platform: curl\" https://api.plot.ly/v2/grids --data '{\"data\": { \"cols\": { \"first column\": {\"data\": [\"a\", \"b\", \"c\"], \"order\": 0}, \"second column\": {\"data\": [1, 2, 3], \"order\": 1} } } }'"
]
}
],
"metadata": {
"kernelspec": {
"display_name": "Lein-Clojure",
"language": "clojure",
"name": "lein-clojure"
},
"language_info": {
"file_extension": ".clj",
"mimetype": "text/x-clojure",
"name": "clojure",
"version": "1.9.0-RC1"
}
},
"nbformat": 4,
"nbformat_minor": 2
}
CHANGELOG.md
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# Change Log
All notable changes to this project will be documented in this file. This change log follows the conventions of [keepachangelog.com](http://keepachangelog.com/).
## [Unreleased]
### Changed
- Add a new arity to `make-widget-async` to provide a different widget shape.
## [0.1.1] - 2017-11-15
### Changed
- Documentation on how to make the widgets.
### Removed
- `make-widget-sync` - we're all async, all the time.
### Fixed
- Fixed widget maker to keep working when daylight savings switches over.
## 0.1.0 - 2017-11-15
### Added
- Files from the new template.
- Widget maker public API - `make-widget-sync`.
[Unreleased]: https://github.com/your-name/graphly/compare/0.1.1...HEAD
[0.1.1]: https://github.com/your-name/graphly/compare/0.1.0...0.1.1
LICENSE
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THE ACCOMPANYING PROGRAM IS PROVIDED UNDER THE TERMS OF THIS ECLIPSE PUBLIC
LICENSE ("AGREEMENT"). ANY USE, REPRODUCTION OR DISTRIBUTION OF THE PROGRAM
CONSTITUTES RECIPIENT'S ACCEPTANCE OF THIS AGREEMENT.
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b) in the case of each subsequent Contributor:
i) changes to the Program, and
ii) additions to the Program;
where such changes and/or additions to the Program originate from and are
distributed by that particular Contributor. A Contribution 'originates' from
a Contributor if it was added to the Program by such Contributor itself or
anyone acting on such Contributor's behalf. Contributions do not include
additions to the Program which: (i) are separate modules of software
distributed in conjunction with the Program under their own license
agreement, and (ii) are not derivative works of the Program.
"Contributor" means any person or entity that distributes the Program.
"Licensed Patents" mean patent claims licensable by a Contributor which are
necessarily infringed by the use or sale of its Contribution alone or when
combined with the Program.
"Program" means the Contributions distributed in accordance with this
Agreement.
"Recipient" means anyone who receives the Program under this Agreement,
including all Contributors.
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a) Subject to the terms of this Agreement, each Contributor hereby grants
Recipient a non-exclusive, worldwide, royalty-free copyright license to
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such derivative works, in source code and object code form.
b) Subject to the terms of this Agreement, each Contributor hereby grants
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transfer the Contribution of such Contributor, if any, in source code and
object code form. This patent license shall apply to the combination of the
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README.md
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# graphly
FIXME: description
## Installation
Download from http://example.com/FIXME.
## Usage
FIXME: explanation
$ java -jar graphly-0.1.0-standalone.jar [args]
## Options
FIXME: listing of options this app accepts.
## Examples
...
### Bugs
...
### Any Other Sections
### That You Think
### Might be Useful
## License
Copyright © 2017 FIXME
Distributed under the Eclipse Public License either version 1.0 or (at
your option) any later version.
doc/intro.md
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# Introduction to graphly
TODO: write [great documentation](http://jacobian.org/writing/what-to-write/)
plotly.ipynb
+201
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{
"cells": [
{
"cell_type": "markdown",
"metadata": {},
"source": [
"## plotly implementation"
]
},
{
"cell_type": "code",
"execution_count": 29,
"metadata": {},
"outputs": [],
"source": [
"(require '[clojupyter.misc.display :as display]\n",
" '[clojure.java.io :as io]\n",
" '[cheshire.core :as cheshire]\n",
" '[clj-http.client :as client]\n",
" '[clojure.repl :refer :all]) ;; to have all the repl goodies"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"To access plotly api, we need an api key. The standard way is to store the api key in `$HOME/.plotly/.credentials` in a json object as defined in https://plot.ly/python/getting-started/. For that you will need to create a plotly account."
]
},
{
"cell_type": "code",
"execution_count": 61,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"your credentials are:\n",
" {:api_key 6FaFG4sgtpLnDrvzvFT1, :username didier, :stream_ids [8rcf9eam9j zupv6k3u4k]}\n"
]
}
],
"source": [
"(defn get-plotly-credentials\n",
" \"Returs the plotly credentials in $HOME/.plotly/.credentials\"\n",
" []\n",
" (let [home (-> \"HOME\" System/getenv io/as-file)\n",
" credential-file (io/file home \".plotly\" \".credentials\")]\n",
" (if (.exists credential-file)\n",
" (-> credential-file slurp (cheshire/parse-string true))\n",
" {})))\n",
"\n",
"(def plotly-cred (get-plotly-credentials))\n",
"(println \"your credentials are:\\n\" plotly-cred)"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"---\n",
"\n",
"Next, we need to create \"grids\". Grids are dataset stored on plotly that we can then plot. The plotting is done in two phases, uploding the datasets and then plotting the datasets."
]
},
{
"cell_type": "code",
"execution_count": 86,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"#'user/upload-grid"
]
},
"execution_count": 86,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"(defn upload-grid [grid cred] \n",
" (let [url \"https://api.plot.ly/v2/grids\";;\"https://api.plot.ly/v2/grids\" \"https://api.plot.ly/v2/grids\" ;;\n",
" headers {:Plotly-Client-Platform' \"curl\"}\n",
" auth \"didier:6FaFG4sgtpLnDrvzvFT1\"];;[(:username cred) (:api_key cred)]]\n",
" (println auth)\n",
" (client/post url {:basic-auth auth\n",
" :headers headers\n",
" :throw-entire-message? true\n",
" :form-params grid :content-type :json})))"
]
},
{
"cell_type": "code",
"execution_count": 87,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"#'user/my-grid"
]
},
"execution_count": 87,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"(def my-grid {:data \n",
" {:cols\n",
" {\n",
" :height {:data [10 203 102 404] :order 1}\n",
" :weight {:data [112 234 321 34] :order 2}}}})\n",
" "
]
},
{
"cell_type": "code",
"execution_count": 87,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"didier:6FaFG4sgtpLnDrvzvFT1\n",
"ExceptionInfo clj-http: status 401 {:request-time 908, :repeatable? false, :protocol-version {:name \"HTTP\", :major 1, :minor 1}, :streaming? true, :chunked? true, :reason-phrase \"UNAUTHORIZED\", :headers {\"Server\" \"nginx\", \"Via\" \"1.1 google\", \"Content-Type\" \"application/json\", \"Alt-Svc\" \"clear\", \"X-Frame-Options\" \"SAMEORIGIN\", \"Strict-Transport-Security\" \"max-age=31536000; includesubdomains; preload\", \"WWW-Authenticate\" \"Bearer realm=\\\"api\\\"\", \"Allow\" \"GET, POST, HEAD, OPTIONS\", \"Connection\" \"close\", \"Transfer-Encoding\" \"chunked\", \"Set-Cookie\" [\"plotly_sess_pr=z3l151u0weiecpy1jgmvp4bqaic9ksoo; Domain=.plot.ly; expires=Thu, 30-Nov-2017 03:09:02 GMT; httponly; Max-Age=1209600; Path=/; secure\" \"plotly_csrf_pr=b3rFF0ApmkYeHCK9Rjn9kKW30z2OyDkZ; Domain=.plot.ly; expires=Sat, 17-Nov-2018 03:09:02 GMT; Max-Age=31622400; Path=/; secure\" \"plotly_anoncsrf_pr=1Pv2vgnQIhIqOnw6bFy1kf4V2qAyXJ0r; Domain=.plot.ly; expires=Fri, 17-Nov-2017 03:09:02 GMT; httponly; Max-Age=86400; Path=/; secure\" \"GCLB=CNmkk46g4orXggE; path=/; HttpOnly; expires=Fri, 17-Nov-2017 03:09:02 GMT\"], \"Date\" \"Thu, 16 Nov 2017 03:09:02 GMT\", \"Vary\" \"Accept, Authorization, Cookie, Accept-Language\", \"x-xss-protection\" \"1; mode=block\", \"Content-Language\" \"en\"}, :orig-content-encoding nil, :status 401, :length -1, :body \"{\\\"errors\\\":[{\\\"code\\\":\\\"UNKNOWN\\\",\\\"message\\\":\\\"No Plotly-Client-Platform header found\\\",\\\"path\\\":null,\\\"field\\\":null}],\\\"detail\\\":\\\"No Plotly-Client-Platform header found\\\"}\", :trace-redirects []} slingshot.support/stack-trace (support.clj:201)\n"
]
},
{
"ename": "class clojure.lang.ExceptionInfo",
"evalue": "",
"output_type": "error",
"traceback": [
" support.clj: 201 slingshot.support$stack_trace/invoke ",
" client.clj: 238 clj_http.client$exceptions_response/invokeStatic ",
" client.clj: 230 clj_http.client$exceptions_response/invoke ",
" client.clj: 248 clj_http.client$wrap_exceptions$fn__2420/invoke ",
" client.clj: 724 clj_http.client$wrap_accept$fn__2666/invoke ",
" client.clj: 746 clj_http.client$wrap_accept_encoding$fn__2673/invoke ",
" client.clj: 707 clj_http.client$wrap_content_type$fn__2660/invoke ",
" client.clj: 948 clj_http.client$wrap_form_params$fn__2769/invoke ",
" client.clj: 983 clj_http.client$wrap_nested_params$fn__2791/invoke ",
" client.clj: 882 clj_http.client$wrap_method$fn__2727/invoke ",
" cookies.clj: 131 clj_http.cookies$wrap_cookies$fn__773/invoke ",
" links.clj: 63 clj_http.links$wrap_links$fn__2196/invoke ",
" client.clj: 1009 clj_http.client$wrap_unknown_host$fn__2799/invoke ",
" client.clj: 1181 clj_http.client$request_STAR_/invokeStatic ",
" client.clj: 1174 clj_http.client$request_STAR_/invoke ",
" client.clj: 1199 clj_http.client$post/invokeStatic ",
" client.clj: 1195 clj_http.client$post/doInvoke ",
" RestFn.java: 423 clojure.lang.RestFn/invoke ",
" core.clj: 3206 clojure.core$eval/invokeStatic ",
" core.clj: 3202 clojure.core$eval/invoke ",
" main.clj: 243 clojure.main$repl$read_eval_print__8572$fn__8575/invoke",
" main.clj: 261 clojure.main$repl$fn__8581/invoke ",
" main.clj: 177 clojure.main$repl/doInvoke ",
" RestFn.java: 1523 clojure.lang.RestFn/invoke ",
" AFn.java: 152 clojure.lang.AFn/applyToHelper ",
" AFn.java: 144 clojure.lang.AFn/applyTo ",
" core.clj: 657 clojure.core$apply/invokeStatic ",
" core.clj: 1965 clojure.core$with_bindings_STAR_/invokeStatic ",
" RestFn.java: 425 clojure.lang.RestFn/invoke ",
" AFn.java: 22 clojure.lang.AFn/run ",
"ThreadPoolExecutor.java: 1149 java.util.concurrent.ThreadPoolExecutor/runWorker ",
"ThreadPoolExecutor.java: 624 java.util.concurrent.ThreadPoolExecutor$Worker/run ",
" Thread.java: 748 java.lang.Thread/run "
]
}
],
"source": [
"(println (:body (upload-grid my-grid plotly-cred)))"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"curl --user didier:6FaFG4sgtpLnDrvzvFT1 -H \"Content-Type: application/json\" -H \"Plotly-Client-Platform: curl\" https://api.plot.ly/v2/grids --data '{\"data\": { \"cols\": { \"first column\": {\"data\": [\"a\", \"b\", \"c\"], \"order\": 0}, \"second column\": {\"data\": [1, 2, 3], \"order\": 1} } } }'"
]
}
],
"metadata": {
"kernelspec": {
"display_name": "Lein-Clojure",
"language": "clojure",
"name": "lein-clojure"
},
"language_info": {
"file_extension": ".clj",
"mimetype": "text/x-clojure",
"name": "clojure",
"version": "1.9.0-RC1"
}
},
"nbformat": 4,
"nbformat_minor": 2
}
project.clj
+11
View File
@@ -0,0 +1,11 @@
(defproject graphly "0.1.0-SNAPSHOT"
:description "FIXME: write description"
:url "http://example.com/FIXME"
:license {:name "Eclipse Public License"
:url "http://www.eclipse.org/legal/epl-v10.html"}
:dependencies [[org.clojure/clojure "1.9.0-RC1"]
[clj-http "3.7.0"]]
:main ^:skip-aot graphly.core
:plugins [[lein-jupyter "0.1.10"]]
:target-path "target/%s"
:profiles {:uberjar {:aot :all}})
src/graphly/core.clj
+7
View File
@@ -0,0 +1,7 @@
(ns graphly.core
(:gen-class))
(defn -main
"I don't do a whole lot ... yet."
[& args]
(println "Hello, World!"))
test/graphly/core_test.clj
+7
View File
@@ -0,0 +1,7 @@
(ns graphly.core-test
(:require [clojure.test :refer :all]
[graphly.core :refer :all]))
(deftest a-test
(testing "FIXME, I fail."
(is (= 0 1))))